Services for the European Open Science Cloud

Workshop

II GBIF.ES online workshop: Management, visualization and analysis of ecological data using R software (beginner level)

Tuesday, October 6, 2020 - 09:00 to Wednesday, October 21, 2020 - 16:00

This course aims to lay the foundations to use and develop R in an autonomous way and to use the software to manage, manipulate, visualize and analyze ecology and biodiversity data. Special emphasis is placed on those tools that make it possible to be an efficient user of the program.

The workshop is part of the program of specialization courses of the Higher Council for Scientific Research, which will issue a certificate of use for those students who exceed the objectives set.

2nd OPENCoastS e-Tutorial: build your forecast for all circulation choices

Wednesday, January 27, 2021 - 09:00 to Friday, January 29, 2021 - 13:00

LNEC, CNRS/UR, UC and LIP are organizing a detailed course on the full capabilities of OPENCoastS between 27 and 29 of January 2021.
A new, additional module dedicated to the IT frontend and backend of OPENCoastS for developers and system managers will be presented on the last day.

The flyer of the course is available here.

HADDOCK workshop on information – driven modelling of biomolecular complexes

Friday, December 18, 2020 - 09:00 to Saturday, December 19, 2020 - 14:00

HADDOCK workshop on information – driven modelling of biomolecular complexes

Cloud Concepts and Open Source Solutions

Wednesday, October 21, 2020 - 09:00 to Thursday, October 22, 2020 - 09:36

Introduce the DODAS EOSC-hub Thematic Service to the Lebanon researchers

Dynamic On-Demand Analysis Service (DODAS)

Thursday, December 12, 2019 - 11:00 to 18:15

First workshop for the coordination of the activities within the Task 5.1: Common Computing and data handling.

Integrative modeling of biomolecular complexes

Friday, October 2, 2020 - 09:00 to Friday, October 9, 2020 - 18:00

Online Training Week

There were three plenary research seminars by Syma Khalid (University of Southampton), Prem Chapagain (Florida International University, USA) and Viv Kendon (Durham University; Chair of CCP-QC). The other sessions were: Introduction to Software Installation for Biomolecular Simulations, The Basics of Biomolecular Simulations, Seeing Biomolecules with VMD, Setting up an AMBER Simulation, Trusting Your Simulations, Structural Bioinformatics of Variants: Principles and Tools to Study Genetic Variants in the Context of Protein Structure, Validating Biomolecular Structures with ISOLDE, Docking with HADDOCK, How to Interpret Your Docking Scores: A Medicinal Chemistry Perspective, BioSimSpace in Jupyter, Materials Modelling Force Fields: Successes and Limitations, When Cryo-EM Meets Biomolecular Simulations, Large Scale Modelling with DL_MESO, and Modelling Enzymes with QM/MM.

Integrative modeling of biomolecular complexes

Thursday, February 13, 2020 - 09:00 to Friday, February 14, 2020 - 18:15

Bioinformatics has quickly become an integral part of life sciences research by enabling innovative computational approaches in an increasingly data-dense environment.

Inspired by the sold-out editions in 2016 and 2018, VIB (a non-profit life sciences research institute) is organizing this third edition to highlight recent developments in bioinformatics research, and to showcase its impact in medical, agricultural, and biotechnological research.

Nationally and internationally renowned speakers will present recent scientific findings in applied bioinformatics. They will shed light on the future perspectives of their research in the following plenary sessions:

  • Microbial & plant genomics: from simple to complex
  • Structural bioinformatics and proteomics
  • Data integration, machine learning and networks
  • Single cell bioinformatics

Integrative modeling of biomolecular complexes

Tuesday, December 10, 2019 - 10:00 to 16:00

Gathering contributions from experts in the fields, the aim of the workshop is to present the great potential of combining NMR spectroscopy and computational methods for structural elucidations of small molecules, proteins and materials, both in liquid and solid phases. The meeting is intended as an opportunity for a broad audience of interested researchers, from academia and industries, working in materials science and technology, chemistry and life sciences.

Container Security: what could possibly go wrong?

Monday, November 2, 2020 - 11:15 to 12:30

Containers are an emerging technology that is getting more and more popular as an alternative to full virtualization. The flexibility of containers enabled several new approaches in IT, like DevOps. However powerful and attractive the new technology is, we should not ignore security implications that are inherently linked to the principles or main implementations.

The goal of this training session is to discuss selected aspects related to containers and present potential security threats. We will focus mainly on Docker and its typical use-cases. The main principles, however, will be applicable also for other container technologies. The workshop is not meant as an exhaustive training session covering every possible aspect of the technology. Its purpose is to point out some typical problems that are important to consider, some of which are inspired by real-world security incidents.

Data Analysis and Data Knowledge in Digital Humanities

Tuesday, February 18, 2020 - 09:00 to 17:00

One-day training event (in Croatian) where the EOSC-hub services and DARIAH TS services were presented and what are the opportunities in the domain of data analysis and knowledge extraction

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